PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730580.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 643aa MW: 67856 Da PI: 7.8896

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.6e-08	175	219	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W++ Ed l+ av++ G g+W+ I r +Rt+ q+ rw XP_022730580.1 175 RKPWSEAEDMELIAAVQKCGVGNWANILRGDFkGNRTAAQLAQRW 219 789**********************9842236********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MIEKTKKQKK GSISEEDIST ILQRYTATTI LALLQEVAQF PGVKLNWNAL VKKTSTGISN 60 AREYQMLWHH LAYRDALLEK LEDGAEPLVL IASGLPSDSS RANSSTVEAS LRINVPNVQS 120 FRVSSENSQH TCSMQGTNIT VPVSVQKQIL PAVTSAETLE GSGSAGVNQS SRRKRKPWSE 180 AEDMELIAAV QKCGVGNWAN ILRGDFKGNR TAAQLAQRWT IIKKRLVNLN VEGNSTIPQL 240 SEAQLATRSA LSLALDMPDK NLTAACTNNP GLKPSSSNPA LPTTSGEASV QAQNQSQQGP 300 ITSVSTHNQP QKGPITYVPA QNLSQQGPVA SVQVPNQSQQ GPMTTKTSPR GPSASTLKSR 360 VSLKKPPAKS FPCTGSILDA TAVAAGARIG SPEAAAFLLK AAQSKNAIHI MASGGSSVKP 420 LMPGGTSSHL EVHSNVQYVS TGLTAEPVSS PVVSSSTLHP GSVKSATYRV EHTPASSSLL 480 NASTQQCNAV TSGPTVEGPL KEEIEAALEI KGSVSDSLPK EQVQENGACV SKNEPGEGVK 540 EHKAAASNPN EFKDLEAVAE HPNGTLMVES DQVDVTANLV EESQTGNDSK IDYSLVKKSD 600 NQPAAEESSR NQSMIKSPAE ASLNDGSTKN LEVLSKAETG QAK

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MIEKTKKQKK GSISEEDIST ILQRYTATTI LALLQEVAQF PGVKLNWNAL VKKTSTGISN  60
AREYQMLWHH LAYRDALLEK LEDGAEPLVL IASGLPSDSS RANSSTVEAS LRINVPNVQS  120
FRVSSENSQH TCSMQGTNIT VPVSVQKQIL PAVTSAETLE GSGSAGVNQS SRRKRKPWSE  180
AEDMELIAAV QKCGVGNWAN ILRGDFKGNR TAAQLAQRWT IIKKRLVNLN VEGNSTIPQL  240
SEAQLATRSA LSLALDMPDK NLTAACTNNP GLKPSSSNPA LPTTSGEASV QAQNQSQQGP  300
ITSVSTHNQP QKGPITYVPA QNLSQQGPVA SVQVPNQSQQ GPMTTKTSPR GPSASTLKSR  360
VSLKKPPAKS FPCTGSILDA TAVAAGARIG SPEAAAFLLK AAQSKNAIHI MASGGSSVKP  420
LMPGGTSSHL EVHSNVQYVS TGLTAEPVSS PVVSSSTLHP GSVKSATYRV EHTPASSSLL  480
NASTQQCNAV TSGPTVEGPL KEEIEAALEI KGSVSDSLPK EQVQENGACV SKNEPGEGVK  540
EHKAAASNPN EFKDLEAVAE HPNGTLMVES DQVDVTANLV EESQTGNDSK IDYSLVKKSD  600
NQPAAEESSR NQSMIKSPAE ASLNDGSTKN LEVLSKAETG QAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-65	MYB_related family protein