PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730637.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 225aa    MW: 24416.8 Da    PI: 8.7149
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260133.77.3e-42401391100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++C+++pyf  ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA+ r+rdPvyG++g i +lqqq+++l+ael+
  XP_022730637.1  40 PCAACKLLRRRCAEECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAIVTLQQQMQTLQAELN 134
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022730637.1 135 VVRAE 139
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MSRDRERFDE IGKKIKTDAS SEMGRRHLLG PPGTLNTITP CAACKLLRRR CAEECPFSPY  60
FSPHEPQKFA SVHKVFGASN VSKMLMEVPE SQRADAANSL VYEANLRLRD PVYGCMGAIV  120
TLQQQMQTLQ AELNVVRAEI LKYKFREAST SNIIPSSHTQ AALISPRAVS IAVSSSPLLP  180
PTPPPPPPSI VVSSSSSSST SSLYTPPTSA AGYTSISSDN VPYFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.11e-84LBD family protein