PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730638.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 203aa    MW: 21835.9 Da    PI: 8.7209
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601345.7e-42181171100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++C+++pyf  ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA+ r+rdPvyG++g i +lqqq+++l+ael+
  XP_022730638.1  18 PCAACKLLRRRCAEECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAIVTLQQQMQTLQAELN 112
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022730638.1 113 VVRAE 117
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGRRHLLGPP GTLNTITPCA ACKLLRRRCA EECPFSPYFS PHEPQKFASV HKVFGASNVS  60
KMLMEVPESQ RADAANSLVY EANLRLRDPV YGCMGAIVTL QQQMQTLQAE LNVVRAEILK  120
YKFREASTSN IIPSSHTQAA LISPRAVSIA VSSSPLLPPT PPPPPPSIVV SSSSSSSTSS  180
LYTPPTSAAG YTSISSDNVP YFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.14e-75LBD family protein