PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730708.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ERF
Protein Properties Length: 254aa    MW: 27604.4 Da    PI: 4.6525
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.1e-1856106155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_022730708.1  56 SVYRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALSIKG 106
                     78*****998.**********854...59**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGDSPNSETE SSTLSNNSSA FSPPSPSSYG GKTKADTDPT PDPKRQKRTR DSSKHSVYRG  60
VRMRTWGKWV SEIREPRKKN RIWLGTFSTP EMAARAHDVA ALSIKGNSAI LNFPELAGLW  120
PLPTSKSPRD VQAAAAKAAS MELLSNTSTS NNINATSSSS SSSASISSSS NVDDVSTPEE  180
LSEIVELPSL GTSYESAEPG SEFVYVDPVD GWLFNPNCIP WYYEETCGYF GEEISMQMQE  240
SVITTGFGPL LWDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-56ERF family protein