PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730709.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ERF
Protein Properties Length: 230aa    MW: 25425.7 Da    PI: 4.8093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-182373155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  XP_022730709.1 23 SKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALYCLRG 73
                    89*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVKPSCTQSS TSPTEHVLET SSSKYKGVRK RKWGKWVSEI RLPNSRERIW LGSYDSAEKA  60
ARAFDAALYC LRGRDAKFNF PENPPEIVGG RSLGPQEIQV AAARFANEVE AGRTPGNDND  120
SNIITSNEPH SRNNNNAGTE QHTSSSSVSV SDGGVATQVE IHEIMDWSSF LSMLDTNQRI  180
SDYGFYSGFS HLPGDQFYPP PLSPPPIDDN VDDNQNGDDG FSQSSFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12632KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.16e-49ERF family protein