PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730721.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 318aa    MW: 34931.8 Da    PI: 10.1145
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.21e-1493138247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+ +++ + ++lG+g+W+ I++ + ++Rt+ q+ s+ qky
   XP_022730721.1  93 KPWTEEEHRIFLTGLRKLGKGNWRGISKNFVTNRTPTQVASHAQKY 138
                      58*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVKEAGRKCS YCGYNGHNSR TCNGKGGCIK IFGVNIAAME KQEIFMKKSH SMGNLQSHAE  60
NNNAAAVHDD GYLSDGQIHS KKNKAAHERK RGKPWTEEEH RIFLTGLRKL GKGNWRGISK  120
NFVTNRTPTQ VASHAQKYFL RQAGTDKKKR RPSLFDLAFQ ESESKASPPG SPSEETTRNS  180
SQIVNRFPHL CLDDRPVTSL TASHSFPTYY HGTQPMTGAP NRQCFPEAQM IPSLPFLHAM  240
NDAGPPYGYM AKALGNVAIC APAAHPCGIP LPGLVQHRMF RACPGASSME KDILELKIGP  300
PQSSKNTSLT SQASIRVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147151KKKRR
2147152KKKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.11e-70MYB_related family protein