PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730752.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 553aa MW: 61883.2 Da PI: 7.8392

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.8	1.3e-10	377	421	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f Lr+llP+ +K +Ka++L+ A e++ sL XP_022730752.1 377 HMISERKRREKLNESFIALRSLLPSG-----TKKDKASVLTSARECLTSL 421 8899*******************8.....7***********99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MDAVFHLDEA SRAEFLQFLM HSTGGTYICL WSYSYLHQAN CLIGWDGCFN EENTQPGALG 60 LFVEYRQLIF PLENDKYDKI FITKFVLFDQ LSYILGINLL GFLLYSGLFP GFAFRNNRPY 120 VELGEPELRN RASHRTQRQF YQEAGIKTAV FMGCRSGEIE LGFSNVVQLN MEMEVRSFFP 180 DDFSRQLSSI GDQLPQPTDP NRPSSSSSSL RSLSAGSPDS SLIFTIPSAS HLQVPTTETT 240 TSSMQAISSP IDHPHQQAMQ ALSQMRSNIQ LPTIESENDA MIKAILAVLT SPSSSSSSSI 300 AHHPQQSQNL PHNYQLNPKA CSAFKRYASA LAPTTPVRAS LRAQSMLKRA ILFYRKCNLA 360 RCEQLLRSRP TSSQLHHMIS ERKRREKLNE SFIALRSLLP SGTKKDKASV LTSARECLTS 420 LKAQIVELSR QNQLLEAQLL PSREAAGGEA NGSSNERIGV RITPASESTS EQRITDLRVS 480 VRGERPIVDI LIHLLEFLKL DRNVSLMSIE ANTQITELGS VHHINLRLRI EGNGWDESSF 540 QEAVRRLVAD LAQ

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MDAVFHLDEA SRAEFLQFLM HSTGGTYICL WSYSYLHQAN CLIGWDGCFN EENTQPGALG  60
LFVEYRQLIF PLENDKYDKI FITKFVLFDQ LSYILGINLL GFLLYSGLFP GFAFRNNRPY  120
VELGEPELRN RASHRTQRQF YQEAGIKTAV FMGCRSGEIE LGFSNVVQLN MEMEVRSFFP  180
DDFSRQLSSI GDQLPQPTDP NRPSSSSSSL RSLSAGSPDS SLIFTIPSAS HLQVPTTETT  240
TSSMQAISSP IDHPHQQAMQ ALSQMRSNIQ LPTIESENDA MIKAILAVLT SPSSSSSSSI  300
AHHPQQSQNL PHNYQLNPKA CSAFKRYASA LAPTTPVRAS LRAQSMLKRA ILFYRKCNLA  360
RCEQLLRSRP TSSQLHHMIS ERKRREKLNE SFIALRSLLP SGTKKDKASV LTSARECLTS  420
LKAQIVELSR QNQLLEAQLL PSREAAGGEA NGSSNERIGV RITPASESTS EQRITDLRVS  480
VRGERPIVDI LIHLLEFLKL DRNVSLMSIE ANTQITELGS VHHINLRLRI EGNGWDESSF  540
QEAVRRLVAD LAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	386	ERKRRE
2	382	387	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	1e-70	bHLH family protein