PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730753.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 544aa MW: 60736 Da PI: 7.7952

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.8	1.2e-10	368	412	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f Lr+llP+ +K +Ka++L+ A e++ sL XP_022730753.1 368 HMISERKRREKLNESFIALRSLLPSG-----TKKDKASVLTSARECLTSL 412 8899*******************8.....7***********99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MDAVFHLDEA SRAEFLQFLM HSTGGTYICL CCLIGWDGCF NEENTQPGAL GLFVEYRQLI 60 FPLENDKYDK IFITKFVLFD QLSYILGINL LGFLLYSGLF PGFAFRNNRP YVELGEPELR 120 NRASHRTQRQ FYQEAGIKTA VFMGCRSGEI ELGFSNVVQL NMEMEVRSFF PDDFSRQLSS 180 IGDQLPQPTD PNRPSSSSSS LRSLSAGSPD SSLIFTIPSA SHLQVPTTET TTSSMQAISS 240 PIDHPHQQAM QALSQMRSNI QLPTIESEND AMIKAILAVL TSPSSSSSSS IAHHPQQSQN 300 LPHNYQLNPK ACSAFKRYAS ALAPTTPVRA SLRAQSMLKR AILFYRKCNL ARCEQLLRSR 360 PTSSQLHHMI SERKRREKLN ESFIALRSLL PSGTKKDKAS VLTSARECLT SLKAQIVELS 420 RQNQLLEAQL LPSREAAGGE ANGSSNERIG VRITPASEST SEQRITDLRV SVRGERPIVD 480 ILIHLLEFLK LDRNVSLMSI EANTQITELG SVHHINLRLR IEGNGWDESS FQEAVRRLVA 540 DLAQ

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MDAVFHLDEA SRAEFLQFLM HSTGGTYICL CCLIGWDGCF NEENTQPGAL GLFVEYRQLI  60
FPLENDKYDK IFITKFVLFD QLSYILGINL LGFLLYSGLF PGFAFRNNRP YVELGEPELR  120
NRASHRTQRQ FYQEAGIKTA VFMGCRSGEI ELGFSNVVQL NMEMEVRSFF PDDFSRQLSS  180
IGDQLPQPTD PNRPSSSSSS LRSLSAGSPD SSLIFTIPSA SHLQVPTTET TTSSMQAISS  240
PIDHPHQQAM QALSQMRSNI QLPTIESEND AMIKAILAVL TSPSSSSSSS IAHHPQQSQN  300
LPHNYQLNPK ACSAFKRYAS ALAPTTPVRA SLRAQSMLKR AILFYRKCNL ARCEQLLRSR  360
PTSSQLHHMI SERKRREKLN ESFIALRSLL PSGTKKDKAS VLTSARECLT SLKAQIVELS  420
RQNQLLEAQL LPSREAAGGE ANGSSNERIG VRITPASEST SEQRITDLRV SVRGERPIVD  480
ILIHLLEFLK LDRNVSLMSI EANTQITELG SVHHINLRLR IEGNGWDESS FQEAVRRLVA  540
DLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	372	377	ERKRRE
2	373	378	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	9e-72	bHLH family protein