PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730754.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 523aa MW: 58328.9 Da PI: 7.6214

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.9	1.2e-10	347	391	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f Lr+llP+ +K +Ka++L+ A e++ sL XP_022730754.1 347 HMISERKRREKLNESFIALRSLLPSG-----TKKDKASVLTSARECLTSL 391 8899*******************8.....7***********99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MDAVFHLDEA SRAEFLQFLM HSTGGTYICL WSYSYLHQAN CLIGWDGCFN EENTQPGALG 60 LFVEYRQLIF PLENDNGLFP GFAFRNNRPY VELGEPELRN RASHRTQRQF YQEAGIKTAV 120 FMGCRSGEIE LGFSNVVQLN MEMEVRSFFP DDFSRQLSSI GDQLPQPTDP NRPSSSSSSL 180 RSLSAGSPDS SLIFTIPSAS HLQVPTTETT TSSMQAISSP IDHPHQQAMQ ALSQMRSNIQ 240 LPTIESENDA MIKAILAVLT SPSSSSSSSI AHHPQQSQNL PHNYQLNPKA CSAFKRYASA 300 LAPTTPVRAS LRAQSMLKRA ILFYRKCNLA RCEQLLRSRP TSSQLHHMIS ERKRREKLNE 360 SFIALRSLLP SGTKKDKASV LTSARECLTS LKAQIVELSR QNQLLEAQLL PSREAAGGEA 420 NGSSNERIGV RITPASESTS EQRITDLRVS VRGERPIVDI LIHLLEFLKL DRNVSLMSIE 480 ANTQITELGS VHHINLRLRI EGNGWDESSF QEAVRRLVAD LAQ

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MDAVFHLDEA SRAEFLQFLM HSTGGTYICL WSYSYLHQAN CLIGWDGCFN EENTQPGALG  60
LFVEYRQLIF PLENDNGLFP GFAFRNNRPY VELGEPELRN RASHRTQRQF YQEAGIKTAV  120
FMGCRSGEIE LGFSNVVQLN MEMEVRSFFP DDFSRQLSSI GDQLPQPTDP NRPSSSSSSL  180
RSLSAGSPDS SLIFTIPSAS HLQVPTTETT TSSMQAISSP IDHPHQQAMQ ALSQMRSNIQ  240
LPTIESENDA MIKAILAVLT SPSSSSSSSI AHHPQQSQNL PHNYQLNPKA CSAFKRYASA  300
LAPTTPVRAS LRAQSMLKRA ILFYRKCNLA RCEQLLRSRP TSSQLHHMIS ERKRREKLNE  360
SFIALRSLLP SGTKKDKASV LTSARECLTS LKAQIVELSR QNQLLEAQLL PSREAAGGEA  420
NGSSNERIGV RITPASESTS EQRITDLRVS VRGERPIVDI LIHLLEFLKL DRNVSLMSIE  480
ANTQITELGS VHHINLRLRI EGNGWDESSF QEAVRRLVAD LAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	351	356	ERKRRE
2	352	357	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-75	bHLH family protein