PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730768.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 261aa    MW: 28618.5 Da    PI: 10.9314
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.6e-13105149347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022730768.1 105 PWTEDEHRIFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 149
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTT FRRTVVGGLR LFGVQLDISS SSVANMKKSF SMDCLSSASP  60
SSPSPSSSLS PSRVNSMDEN SDKTSNGYLS DGLMGRSPDR KKGVPWTEDE HRIFLIGLEK  120
LGKGDWRGIS RNFVTTRTPT QVASHAQKYF LRQATLNKKK RRSSLFDIVR SSSMVGPHVN  180
SQPKITRTIP QLGLHHHHHH AMPVKLQHGF TDSQTKTSNA AESMSSNVVL DLDLTLAAPR  240
PALEEKKSSP ATLLIRPISV T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.17e-64MYB_related family protein