PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730873.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 185aa    MW: 20876.6 Da    PI: 8.0042
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY203.29.8e-6381586170
           YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
                      +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++           +  + +++++++   +++  +++ s+  
  XP_022730873.1   8 GPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDA----------QAPNYATQDYRTDLGSSSRCNNKFSMRA 92 
                     689********************************************9999999885..........2222222222222222222222222222 PP

           YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                      +    ++v++   v+rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl
  XP_022730873.1  93 -PV---NNVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGL 158
                     .22...2233334589****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MSSCIDVGPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS  60
WQDAQAPNYA TQDYRTDLGS SSRCNNKFSM RAPVNNVTEE RVVNRPPEKR QRVPSAYNQF  120
IKEEIQRIKA NNPEISHREA FSTAAKNWAH FPHIHFGLML ESNNQTKLDD GSEKHLVSRT  180
ALLNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.13e-85YABBY family protein