PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730947.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 321aa MW: 34055.6 Da PI: 6.1057

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00086	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H XP_022730947.1 137 YECKTCNRSFPSFQALGGHRTSH 159 99*********999998888777 PP
2	zf-C2H2	13.1	0.00028	215	237	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_022730947.1 215 HECSICGSEFTSGQALGGHMRRH 237 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MDTQAQEEFV GSNDHQALIM KGKRTKRQRS LSPFGVTVTS SSSSACDGDG DVGGGGGGGG 60 GGGVAEEYNS ISSPTTSGEI YESTEEEEDM ANCLIMLAQS DGPKRSSIEE KFKIEKFGAR 120 KFSEIATTTN KAGFYVYECK TCNRSFPSFQ ALGGHRTSHK KPKGAMAEDK KPVVLAVKDR 180 DVEEAQFNRE NPVLALQVSN NNKANCHGNK GNKIHECSIC GSEFTSGQAL GGHMRRHRAA 240 AAAAAAAAAA AAASNQTAMS VDTTSTTIDS SNGDDIKPRN ILSLDLNLPA PEDDLRDSKF 300 QFGTPQQAIV FSTPALVDCH Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-61	C2H2 family protein