PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730986.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 307aa    MW: 34593.7 Da    PI: 9.6317
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.4e-19174207134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022730986.1 174 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 207
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MTSSNYYSSL YPFPIDLNED DQHQQHQLFS LKSQPSSSSS SPSFTCPIFF NPTVQDQQAG  60
YYQREPQQFQ DQEEEKIYVP QDGPLESDSG LKLSIWKKEE RVESHQSHEN VSSAKWMSSK  120
MRMMRKMTSS DHTDLWNSST PKFEDHQKQQ PSTSPDNSSN SSYNNNNNNT IRVCADCNTT  180
KTPLWRSGPR GPKSLCNACG IRQRKARRAM AAAAAAAANG TVVAAETTPT MKSKVQQKAK  240
RSSNGCVPQF KNKKCKRSPQ SHGRKKLCFE DLRIILSKNS AFHRVFPQDE KEAAILLMAL  300
SYGLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-34GATA family protein