PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731000.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 312aa    MW: 34311.2 Da    PI: 6.7062
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13.1e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+ +v+ +G+g +W + +++ g++R++k+c++rw++yl
   XP_022731000.1 14 RGPWSPEEDATLKSYVETHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding45.91.3e-1469111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd ++  +  q+G++ W++Ia+ ++ gRt++++k++w++
   XP_022731000.1  69 GGFTEEEDNIICTLYSQMGSR-WSLIASQLP-GRTDNDVKNYWNT 111
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDATLKSYVE THGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPDIKHGG FTEEEDNIIC TLYSQMGSRW SLIASQLPGR TDNDVKNYWN TKLKKKLLAG  120
KSSFSISKSN NNGFGPSNTN ILTQPASSQP CLPKAETYNL DYSTSQSHIS TALPVLSDVG  180
YGFSVNGTQN LLLDPVMHFS GHLSQLGATL ENSHIVTSSQ DGSGISDSTS LATESKSVSM  240
PYNGYHVEDT GNILMDQFSY EFPYEFVNGI WSQEKAGEVV PSCYDSLIDF SHADIKPQGL  300
NQSVVNRYGE RN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.13e-72MYB family protein