PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731090.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 318aa    MW: 35110.5 Da    PI: 9.7553
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.35e-19186219134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  XP_022731090.1 186 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 219
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MTPVYLNPPA PSFPLVEVKQ EQHLQLFLSP QQPAASSLSA DHPTTFFNTI TQDQSVAAVT  60
KPEDSKPYDH KVNKFMTREG SSERQPSSLI SSLEYSGVDI HSAANGHDLS FSRKEGGDYE  120
SASNNNASSS VKWMSSKMRL MKKMMNSNCS NGSGDNKPVN KFQYPIHDSD NKSNSLSKTN  180
NSIRVCSDCN TTTTPLWRSG PRGPKSLCNA CGIRQRKARR AMEAAAAVNG AAVPTDATSM  240
KIKVHINREK KSRTSHVRQY KKHQFKDPSD YNSSHKKLCF KELALSLSKN STLQPVFPQD  300
VEDAAILLME LSCGLLHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.15e-16GATA family protein