PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731127.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 311aa    MW: 34854.9 Da    PI: 4.9232
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.71.5e-142673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l+++    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_022731127.1 26 KGLWSPDEDDKLINYMLNNGQGCWNDVARNAGLQRCGKSCRLRWINYL 73
                     678*******************************************97 PP
2Myb_DNA-binding52.88.8e-1779122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+el+v+++  lG++ W+ Ia++++ gRt++++k++w++
   XP_022731127.1  79 RGAFSPQEEELIVHLHSILGNR-WSQIAARLP-GRTDNEVKNFWNS 122
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MMRKPDPSVK GSNGGNNINV TSKLRKGLWS PDEDDKLINY MLNNGQGCWN DVARNAGLQR  60
CGKSCRLRWI NYLRPDLKRG AFSPQEEELI VHLHSILGNR WSQIAARLPG RTDNEVKNFW  120
NSTIKRRLKN LSPNASDSST SEPNKDAMAG FMSMQEQGIL PMCMDLSSTS SNSALQPMLL  180
NHHIGNSLPM LENGLNVFGA TGYVNQTSFV TQVGVNADSF YGENEMFGGV EYVPPLESIG  240
ENLKTENSFD RNINNPFNII NSNNNNNNKL ENTATAAVEN FWIGEELEVG EWDLEVIWLD  300
VSSFHFLEFQ S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.12e-73MYB family protein