PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731142.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 344aa MW: 38511.7 Da PI: 7.3581

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	8e-05	184	203	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022731142.1 184 FSCPLCFKTFNRYNNMQMHM 203 89*****************9 PP
2	zf-C2H2	13.7	0.00019	269	290	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +Cgk F + + ++H +++ XP_022731142.1 269 TCRKCGKAFAVRGDWRTHEKNC 290 8*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSDSDPSSSY FNECFNLNPF NHFLPSAHTS NPSSHAPNHA YNIYSNTNHG NSLTQYFQAS 60 PPSPPLKEAL PLLSLSPTKH EEPEDSYSAS KEMEKNKDKE ESCYSSLGDD GTVTLALHLG 120 LPSPSSSSDL ISRFSAADDQ QFSATAVADK EDVTVASYYQ SNTLNKGQYW IPTPAQILIG 180 PTQFSCPLCF KTFNRYNNMQ MHMWGHGSQY RKGPDSLRGT QPTAMLRLPC YCCAPGCRNN 240 IDHPRSKPLK DFRTLQTHYK RKHGIKPLTC RKCGKAFAVR GDWRTHEKNC GKLWYCTCGS 300 DFKHKRSLKD HIKAFGNGHA AYGIDSFDED EPASEIEQDN ESSQ

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSDSDPSSSY FNECFNLNPF NHFLPSAHTS NPSSHAPNHA YNIYSNTNHG NSLTQYFQAS  60
PPSPPLKEAL PLLSLSPTKH EEPEDSYSAS KEMEKNKDKE ESCYSSLGDD GTVTLALHLG  120
LPSPSSSSDL ISRFSAADDQ QFSATAVADK EDVTVASYYQ SNTLNKGQYW IPTPAQILIG  180
PTQFSCPLCF KTFNRYNNMQ MHMWGHGSQY RKGPDSLRGT QPTAMLRLPC YCCAPGCRNN  240
IDHPRSKPLK DFRTLQTHYK RKHGIKPLTC RKCGKAFAVR GDWRTHEKNC GKLWYCTCGS  300
DFKHKRSLKD HIKAFGNGHA AYGIDSFDED EPASEIEQDN ESSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-129	C2H2 family protein