PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731221.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 614aa MW: 70545.5 Da PI: 6.9985

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	102.1	4.3e-32	424	508	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev aLi++r ++e+++r+ lk+plWeevs++m++ g++rs+k+Ckekwen+nk+++k ke+ kkr s++s+tcpyfdql+ XP_022731221.1 424 RWPRAEVEALIQVRCNLESKFREPGLKGPLWEEVSSFMASLGYQRSAKRCKEKWENINKYFRKSKENVKKR-SQQSKTCPYFDQLD 508 8******************************************************************98.78889******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MHPVKYGAHH LQQQLLMDDD GSSSSVFSIS NPYHQQQQSV LHPNYPLHFQ QQQKQHQTLF 60 QQHSLPVTHQ LFQHHHQHQF QPFQEQAETV HHHHVHQQPF LAVNFKLGLN ENSRKKEVAL 120 ALNHQTNDAT FLHGNEQHVP ENRRPQQHSL LTPHCWHPQE DSPIKEPFWK PLNRCEDRQC 180 SGDEAREIEW NKYNKVLQQP DQCTSERSKN LENRYRLFGE LEAIYGLAKG GETTRAGSGS 240 ALTGENSPAN VGLSMLLTEF QGHNVGANVG FGNVATGVDH GSEASIGEEA SLRKIQKKKR 300 KKKMKEQLSS MVGFFESLVK QVMDHQEGLH RRFLEVIERM DKERSVKEES WSRQEAEKRN 360 REAIARAHEQ ALASSREAFI VSYLEKITGQ SINLPARAPL LMQRESAIEP YNESTPVKVD 420 NNSRWPRAEV EALIQVRCNL ESKFREPGLK GPLWEEVSSF MASLGYQRSA KRCKEKWENI 480 NKYFRKSKEN VKKRSQQSKT CPYFDQLDQL YSRIPITCPT SPTPLINSYI EMQQQDDSNF 540 LEAYMPKRDL GTAQVNGSGN LKVSEMNFPK LDFDGAVCEN IVQGSNRKDN ESHGNYLNNE 600 GERVDDDNES DGEE

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MHPVKYGAHH LQQQLLMDDD GSSSSVFSIS NPYHQQQQSV LHPNYPLHFQ QQQKQHQTLF  60
QQHSLPVTHQ LFQHHHQHQF QPFQEQAETV HHHHVHQQPF LAVNFKLGLN ENSRKKEVAL  120
ALNHQTNDAT FLHGNEQHVP ENRRPQQHSL LTPHCWHPQE DSPIKEPFWK PLNRCEDRQC  180
SGDEAREIEW NKYNKVLQQP DQCTSERSKN LENRYRLFGE LEAIYGLAKG GETTRAGSGS  240
ALTGENSPAN VGLSMLLTEF QGHNVGANVG FGNVATGVDH GSEASIGEEA SLRKIQKKKR  300
KKKMKEQLSS MVGFFESLVK QVMDHQEGLH RRFLEVIERM DKERSVKEES WSRQEAEKRN  360
REAIARAHEQ ALASSREAFI VSYLEKITGQ SINLPARAPL LMQRESAIEP YNESTPVKVD  420
NNSRWPRAEV EALIQVRCNL ESKFREPGLK GPLWEEVSSF MASLGYQRSA KRCKEKWENI  480
NKYFRKSKEN VKKRSQQSKT CPYFDQLDQL YSRIPITCPT SPTPLINSYI EMQQQDDSNF  540
LEAYMPKRDL GTAQVNGSGN LKVSEMNFPK LDFDGAVCEN IVQGSNRKDN ESHGNYLNNE  600
GERVDDDNES DGEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	301	LRKIQKKKRK
2	296	303	QKKKRKKK
3	297	303	KKKRKKK
4	298	302	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	2e-53	Trihelix family protein