PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731291.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 312aa    MW: 35017.1 Da    PI: 4.8177
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.71.5e-142673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l+++    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_022731291.1 26 KGLWSPDEDDKLINYMLNNGQGCWNDVARNAGLQRCGKSCRLRWINYL 73
                     678*******************************************97 PP
2Myb_DNA-binding53.94.1e-1779123146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+el+v+++  lG+++W+ Ia++++ gRt++++k++w++
   XP_022731291.1  79 RGAFSPQEEELIVHLHSILGNRCWSQIAARLP-GRTDNEVKNFWNS 123
                      89******************************.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMRKPDPSVK GSNGGNNINV TSKLRKGLWS PDEDDKLINY MLNNGQGCWN DVARNAGLQR  60
CGKSCRLRWI NYLRPDLKRG AFSPQEEELI VHLHSILGNR CWSQIAARLP GRTDNEVKNF  120
WNSTIKRRLK NLSPNASDSS TSEPNKDAMA GFMSMQEQGI WPMCMDLSST SSNSALQPML  180
LNHHIGNSLP MLENGLNVFG ATGYVNQTSF VTQVGVNADS FYGENEMFGG VEYVPPLESI  240
GENLKTENSF DRNINNPFNI INSNNNNNNN LENTATAAVE NFWIGEELEV GEWDLEVIWL  300
DVSSFHFLEF QS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.12e-71MYB family protein