PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731413.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 202aa    MW: 22850.7 Da    PI: 7.9296
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY182.81.8e-564217623170
           YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvir 117
                      vsvP++slf++vtvrCGhC++llsvn+ ++ q+ + ++      k+++  ++ ++++++      ++s+ ++ ++    +  + e+pr+pp i 
  XP_022731413.1  42 EVSVPYNSLFNIVTVRCGHCANLLSVNMGTSFQTFPIQDA----QKQQINTDQDHSNKEC-----GSSSKCNKFPA---FDCAEYEAPRMPP-IP 123
                     69**********************************9996....2223333322222222.....22333333333...3456678999999.99 PP

           YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     PPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  XP_022731413.1 124 PPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 176
                     ***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MKELSPFIPF KLHLSTTAAA SDENRNHFFK VFSVQEVEVE VEVSVPYNSL FNIVTVRCGH  60
CANLLSVNMG TSFQTFPIQD AQKQQINTDQ DHSNKECGSS SKCNKFPAFD CAEYEAPRMP  120
PIPPPEKRQR VPSAYNRFIK EEIQRIKASN PDISHREAFS TAAKNWAHFP HIHFGLKLDG  180
NKQAKLDQAF ADQGAQKSNG YY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-53YABBY family protein