PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731730.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family BBR-BPC
Protein Properties Length: 232aa    MW: 25240 Da    PI: 10.5655
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind249.32.5e-7636232105301
       GAGA_bind 105 tksidslqqlsepqledsave..lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlv 197
                      +s++ +q ++ep l   ++   ++  e  +++ + ++++++ +++ + k++++   k+ + k++kkk++++kk +      +++k+ekk++++ 
  XP_022731730.1  36 LSSMQRSQIHHEPGLVVAPIRsiAPTPESGSNNALGSKTTKVGKQTPSMKGSNQIASKVLRPKQPKKKPSVPKKAKGLII--TEAKREKKNLNID 128
                     45667777777766665555544566666677777777778888888888999999999********9999966665555..68*********** PP

       GAGA_bind 198 lngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkH 292
                     l+g ++D s++P P+CsCtG+ r+CYkWG+GGWqS+CCt+++S yPLP+s++r+g R+agrKmS+ga+ klL +LaaeG+dls+pvDLkdhWA+H
  XP_022731730.1 129 LDGTNFDFSGVPSPICSCTGVGRVCYKWGAGGWQSSCCTINVSEYPLPMSSTRPGVRMAGRKMSNGAYLKLLLRLAAEGHDLSHPVDLKDHWARH 223
                     *********************************************************************************************** PP

       GAGA_bind 293 Gtnkfvtir 301
                     Gtnkfvti+
  XP_022731730.1 224 GTNKFVTIK 232
                     ********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGSYSNKNMM PETDIGSSVS PFSWFYHYNP ASKPSLSSMQ RSQIHHEPGL VVAPIRSIAP  60
TPESGSNNAL GSKTTKVGKQ TPSMKGSNQI ASKVLRPKQP KKKPSVPKKA KGLIITEAKR  120
EKKNLNIDLD GTNFDFSGVP SPICSCTGVG RVCYKWGAGG WQSSCCTINV SEYPLPMSST  180
RPGVRMAGRK MSNGAYLKLL LRLAAEGHDL SHPVDLKDHW ARHGTNKFVT IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.31e-70BBR-BPC family protein