PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731735.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 360aa MW: 39694.1 Da PI: 6.4406

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	55.1	1e-17	250	284	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l XP_022731735.1 250 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 284 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MEAPEFYQAS SYCSQFAPEK PAAGDHFIVE DLFDFSNEDA VITDGTFDSS VAGHSTNSST 60 VTAVESCNSS SFSGCEPNLA GDIGCRGFTD GQFAGDLCVP YDDLAELEWL SNFVEESFSS 120 DDMQKLQLIS GMKTRPDESS ETRGFQPVLP NQINNAIDNG DDNHGNNNNN PIFHPDMSVP 180 AKARSKRSRA APCNWASRLL VLSPTTSSSE PEIVIPVQLP PPNNAGKKPV KTTSLKKKDG 240 GVANSDGRKC LHCATDKTPQ WRTGPMGPKT LCNACGVRYK SGRLVPEYRP AASPTFVLTK 300 HSNSHRKVLE LRRQKELLRA QQQHQQQFMQ HHHQNMVFDL SNGDDYLIHQ HVGPNFRQLI

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MEAPEFYQAS SYCSQFAPEK PAAGDHFIVE DLFDFSNEDA VITDGTFDSS VAGHSTNSST  60
VTAVESCNSS SFSGCEPNLA GDIGCRGFTD GQFAGDLCVP YDDLAELEWL SNFVEESFSS  120
DDMQKLQLIS GMKTRPDESS ETRGFQPVLP NQINNAIDNG DDNHGNNNNN PIFHPDMSVP  180
AKARSKRSRA APCNWASRLL VLSPTTSSSE PEIVIPVQLP PPNNAGKKPV KTTSLKKKDG  240
GVANSDGRKC LHCATDKTPQ WRTGPMGPKT LCNACGVRYK SGRLVPEYRP AASPTFVLTK  300
HSNSHRKVLE LRRQKELLRA QQQHQQQFMQ HHHQNMVFDL SNGDDYLIHQ HVGPNFRQLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25830.1	4e-85	GATA family protein