PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731872.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 470aa    MW: 52905 Da    PI: 6.2028
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS480.39.3e-147454671374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v++g+le+a+ +L+++s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ +    see+ ++klf+e++P+lk+++
  XP_022731872.1  45 LIHLLLTCANHVATGSLENANIALEQISQLASPDGDTMQRMAAYFTEALADRILKAWPGLHKALNSTRIT--LLSEEVLVRKLFFEMFPFLKVAF 137
                     689*************************************************************999987..69********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea+ege++vHiiD+++ +++QW+aL+qaL++Rpegpp++RiTg+++    +ke l ++++rL++ Ae+l++pf+fn+ ++++le+l+
  XP_022731872.1 138 VLTNQAIIEAMEGEKMVHIIDLNAAEPAQWIALIQALSARPEGPPHMRITGIHQ----QKEVLDQMAHRLTEEAEKLDIPFQFNP-IVSKLENLD 227
                     ******************************************************....9**************************.7999***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll..........................................................desvsleserdev 227
                     +e+Lrvk+gEala+++vlqlh+ll                                                          ++++s+  + d++
  XP_022731872.1 228 IEKLRVKTGEALAICSVLQLHSLLasddehfrkksplamknlngihlqralqmnqntlgellekdmvngyspspdsasssplSSTASV--KVDSF 320
                     ****************************************************************************886654333333..5699* PP

            GRAS 228 LklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleea 322
                     L+++++lsPk++vv+eq+++hn+++++er+le+l+ y+alfd+le++++r+s er kvE++l+g+ei+n++acegaer+erhe+lekW +rl+ a
  XP_022731872.1 321 LNALWGLSPKLMVVTEQDSNHNGSTLMERLLESLHSYAALFDCLESTVSRASLERLKVEKMLFGEEIKNIIACEGAERKERHEKLEKWMQRLDLA 415
                     *********************************************************************************************** PP

            GRAS 323 GFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     GF++vpls++ + qa++ll+ ++ dgy+++ee+g++v++W+drpL+svSaWr
  XP_022731872.1 416 GFGNVPLSYYGMLQARRLLQGYNCDGYKMKEENGCVVICWQDRPLFSVSAWR 467
                     ***************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MFQDESSSVT SSPLQVFSMM SLSPNLGSPY PWLRELKSEE RGLYLIHLLL TCANHVATGS  60
LENANIALEQ ISQLASPDGD TMQRMAAYFT EALADRILKA WPGLHKALNS TRITLLSEEV  120
LVRKLFFEMF PFLKVAFVLT NQAIIEAMEG EKMVHIIDLN AAEPAQWIAL IQALSARPEG  180
PPHMRITGIH QQKEVLDQMA HRLTEEAEKL DIPFQFNPIV SKLENLDIEK LRVKTGEALA  240
ICSVLQLHSL LASDDEHFRK KSPLAMKNLN GIHLQRALQM NQNTLGELLE KDMVNGYSPS  300
PDSASSSPLS STASVKVDSF LNALWGLSPK LMVVTEQDSN HNGSTLMERL LESLHSYAAL  360
FDCLESTVSR ASLERLKVEK MLFGEEIKNI IACEGAERKE RHEKLEKWMQ RLDLAGFGNV  420
PLSYYGMLQA RRLLQGYNCD GYKMKEENGC VVICWQDRPL FSVSAWRCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein