PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731884.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 435aa MW: 48176.4 Da PI: 7.9288

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.2e-13	369	414	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L++l+P+ +k s a++L +Av+YIk+Lq XP_022731884.1 369 SIAERVRRTKISERMRKLQDLVPNM----DKQTSTADMLDLAVDYIKELQ 414 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MESDLQHHHH HLLDYHQPQN HQKQMNSGLM RYQSAPSSYF SNILDRDFCQ EFLNRPTSPE 60 TERIIARFLS GSGDAGGGGG GNTENISNQN LCPVTHNSPV RETAAKIEQR TQIMTPMINQ 120 TGVMQQQQQQ QRGNYSSASQ NFYQSQPQRH LSNQQSGSTM DYRIPNSTGM ARPTQMKMSS 180 GNNTNLIRHS SSPAGLFSNI NIENITGYGV MRGMGDYGSV NISSNKEAAF PSASRPPPSG 240 LMSPIAELGN ENVGPKNSSE NVGFGENRHK NYSSRFPVTS WDNSTMISDN MSGVKGLSED 300 DGSLSGLEFD GVETQNIDAG NHPPPLLAHH LSLPKSSPDM SAIDKFLQYQ DSIPCKIRAK 360 RGCATHPRSI AERVRRTKIS ERMRKLQDLV PNMDKQTSTA DMLDLAVDYI KELQKEVKTL 420 SENRANCSCA NKQQQ

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MESDLQHHHH HLLDYHQPQN HQKQMNSGLM RYQSAPSSYF SNILDRDFCQ EFLNRPTSPE  60
TERIIARFLS GSGDAGGGGG GNTENISNQN LCPVTHNSPV RETAAKIEQR TQIMTPMINQ  120
TGVMQQQQQQ QRGNYSSASQ NFYQSQPQRH LSNQQSGSTM DYRIPNSTGM ARPTQMKMSS  180
GNNTNLIRHS SSPAGLFSNI NIENITGYGV MRGMGDYGSV NISSNKEAAF PSASRPPPSG  240
LMSPIAELGN ENVGPKNSSE NVGFGENRHK NYSSRFPVTS WDNSTMISDN MSGVKGLSED  300
DGSLSGLEFD GVETQNIDAG NHPPPLLAHH LSLPKSSPDM SAIDKFLQYQ DSIPCKIRAK  360
RGCATHPRSI AERVRRTKIS ERMRKLQDLV PNMDKQTSTA DMLDLAVDYI KELQKEVKTL  420
SENRANCSCA NKQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	2e-65	bHLH family protein