PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731886.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 303aa MW: 34610.8 Da PI: 5.7046

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k +G g W+ I+r+ g++R++k+c++rw++yl XP_022731886.1 14 RGAWTATEDKILTDYIKVHGEGKWSNIPREAGLNRCGKSCRLRWRNYL 61 89*********************************************7 PP
2	Myb_DNA-binding	51.3	2.8e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_022731886.1 67 RGNISSDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 78999***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MGRSPCCSKE GMNRGAWTAT EDKILTDYIK VHGEGKWSNI PREAGLNRCG KSCRLRWRNY 60 LRPDIRRGNI SSDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKRGQEKE 120 RRPESNHSKV EKKPITSRMD ENPISSCVIR TKAPRFKEVF ITPDDQIQQH RIVAIPPSVD 180 ANLVQNVAAG LESSDVTFMS CNEENYSLDF LVNIKPREIN ISEILDSGFT NHSHDLDAPE 240 MDKVMKGDDA DTYTSKIAES QAFLLPEEME QNWRGSDYNI QANLDSDFGS LVAFLESAEE 300 WII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	4e-64	MYB family protein