PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732016.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 25370.2 Da    PI: 8.6358
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.34.1e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n + rqvtfskRr g++KKAeELS+LCdaeva+iifs tgkl+e++s
  XP_022732016.1  9 KKIDNVTSRQVTFSKRRRGLFKKAEELSILCDAEVALIIFSATGKLFEFAS 59
                    68***********************************************86 PP
2K-box501.2e-17951702398
           K-box  23 kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     +L kei    +++R++ GedL+ L++ eLqqLe+ Le++l+++ ++K e ++++i+ l kk   lqeenk+L++k+
  XP_022732016.1  95 RLSKEIAAKSHQLRQMRGEDLQGLNIDELQQLEKMLESGLTRVLETKGERMMNEISSLEKKGALLQEENKQLKQKM 170
                     778888888899**************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAREKIKIKK IDNVTSRQVT FSKRRRGLFK KAEELSILCD AEVALIIFSA TGKLFEFASS  60
SMKDILGKYN LHSSNLHKLD RPSLELQLEN SNRIRLSKEI AAKSHQLRQM RGEDLQGLNI  120
DELQQLEKML ESGLTRVLET KGERMMNEIS SLEKKGALLQ EENKQLKQKM LTLCKGKRPV  180
LADSDVVVQE EGMSSESVTN VCSCSNGPPL DDDSSDTSLK LGLPFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-90MIKC_MADS family protein