PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732042.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YC
Protein Properties Length: 216aa    MW: 24442.7 Da    PI: 10.2206
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC41.23.5e-131091981099
           NF-YC  10 iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                      +++++ k  ++P+ rik+i+k+++    +s ++  l+ ka e f+ e+    +  + e ++++l    +a++v     +dfl d vp++
  XP_022732042.1 109 EGEEEESKMCRFPMRRIKRIIKSEDSRMAVSQDVVFLVNKATEKFLEEFCEDGYKCSVEDRKKSLSYKHLATVVHGQSRYDFLSDYVPEK 198
                     44566788999*************99999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MATSKKPKEA ENKKKSNSTP VKETKNPIKR PDKKASATKK PDKSKPKSKP KPKSKPDNNK  60
NKSSNGTLVE SEVIADLSAT TESKEQENGN KSNTNVKPNK RKQKEKKEEG EEEESKMCRF  120
PMRRIKRIIK SEDSRMAVSQ DVVFLVNKAT EKFLEEFCED GYKCSVEDRK KSLSYKHLAT  180
VVHGQSRYDF LSDYVPEKIK AEDALKETNL TETGAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101108RKQKEKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.12e-33NF-YC family protein