PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732205.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 435aa MW: 48465.1 Da PI: 9.6713

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.1	7.3e-21	24	112	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+k+e++aLi a+++++ +lr g+lk+ +W++vs+ + ++g ++s++qC++k+e+l+kry+++k+++ k+ + s++ +f l+ XP_022732205.1 24 CWSKEETMALIGAYKDRWFALRPGNLKASDWDAVSATLsfaIDTGTTKSSVQCRHKIEKLRKRYRAEKQRSLKNPGKFYSSWDLFPLLD 112 7***********************************9999***************************999888899999998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSTPTSPPLQ SSSATATRRV PPPCWSKEET MALIGAYKDR WFALRPGNLK ASDWDAVSAT 60 LSFAIDTGTT KSSVQCRHKI EKLRKRYRAE KQRSLKNPGK FYSSWDLFPL LDSMNFASTS 120 VVGSDDQDHI VDHKVSIFEG FCLKSKKHES IGGNYGSNLD CDPDFRGWCG SNFDFDHKFG 180 GGFGVKCHVN RDFVARGITK LKSNGSVGNA YGSTVDFDHS FGEGVDSVGG FPLKTLGNRS 240 FVKLGFKLKN YGNPNLDYDY DSDLEEYSID EGMGFRTKVS GAWDSVPKGF HQKKRGRVDR 300 SFDPAVDRGG LNGFSSCSRP RLGRKNGSAG LKRGVDPVEE MVSSIKLLAE GFVRMEKMKI 360 EMVKEMEKMR MEMEMKHNGM ILESQQKITD AFAKALLEKK KRKKKLSTLL PNVNGNGVEG 420 WQGDDMVETK KLDVL

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSTPTSPPLQ SSSATATRRV PPPCWSKEET MALIGAYKDR WFALRPGNLK ASDWDAVSAT  60
LSFAIDTGTT KSSVQCRHKI EKLRKRYRAE KQRSLKNPGK FYSSWDLFPL LDSMNFASTS  120
VVGSDDQDHI VDHKVSIFEG FCLKSKKHES IGGNYGSNLD CDPDFRGWCG SNFDFDHKFG  180
GGFGVKCHVN RDFVARGITK LKSNGSVGNA YGSTVDFDHS FGEGVDSVGG FPLKTLGNRS  240
FVKLGFKLKN YGNPNLDYDY DSDLEEYSID EGMGFRTKVS GAWDSVPKGF HQKKRGRVDR  300
SFDPAVDRGG LNGFSSCSRP RLGRKNGSAG LKRGVDPVEE MVSSIKLLAE GFVRMEKMKI  360
EMVKEMEKMR MEMEMKHNGM ILESQQKITD AFAKALLEKK KRKKKLSTLL PNVNGNGVEG  420
WQGDDMVETK KLDVL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	398	406	EKKKRKKKL
2	399	405	KKKRKKK
3	400	404	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	1e-28	Trihelix family protein