PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732333.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 301aa MW: 33792.1 Da PI: 8.4187

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.1	7.1e-19	139	193	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k XP_022732333.1 139 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 193 778899***********************************************98 PP
2	HD-ZIP_I/II	128.7	2.4e-41	139	228	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+ en+rL+kev+eLr +l XP_022732333.1 139 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTVENRRLQKEVHELR-AL 228 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MMVGKEDLGL SLSLSFPQNH HSLQLNLRPS LANSCSSPSG LTHQKPSWND ASAPSVWSLH 60 ADPNSESFRA ETRSFLRGID VNRLPSTVDC EEEAGVSSPN STISSVSGKR SEREGNGDEL 120 EIERACSRGI SDEEDGDTRK KLRLSKDQSA ILEESFKEHN TLNPKQKLAL AKQLGLRPRQ 180 VEVWFQNRRA RTKLKQTEVD CEFLKRCCEN LTVENRRLQK EVHELRALKL SPQFYMQMTP 240 PTTLTMCPSC ERVAVPLNAS STVDPRFRQL AQTHHRPIQI NPWAPATPSP HGPPDALRPR 300 S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	144	TRKKLRL
2	188	196	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-105	HD-ZIP family protein