PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732340.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 295aa MW: 33098.3 Da PI: 8.4165

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.9e-19	133	187	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k XP_022732340.1 133 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 187 778899***********************************************98 PP
2	HD-ZIP_I/II	128.8	2.3e-41	133	222	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+ en+rL+kev+eLr +l XP_022732340.1 133 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTVENRRLQKEVHELR-AL 222 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MMVGKEDLGL SLSLSFPQNH HSLQLNLRPS LANSCSSPSG LTHQKPSWND ASAPSDPNSE 60 SFRAETRSFL RGIDVNRLPS TVDCEEEAGV SSPNSTISSV SGKRSEREGN GDELEIERAC 120 SRGISDEEDG DTRKKLRLSK DQSAILEESF KEHNTLNPKQ KLALAKQLGL RPRQVEVWFQ 180 NRRARTKLKQ TEVDCEFLKR CCENLTVENR RLQKEVHELR ALKLSPQFYM QMTPPTTLTM 240 CPSCERVAVP LNASSTVDPR FRQLAQTHHR PIQINPWAPA TPSPHGPPDA LRPRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	138	TRKKLRL
2	182	190	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-107	HD-ZIP family protein