PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732342.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 218aa    MW: 24574.3 Da    PI: 9.5898
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF741.2e-231664149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+i  k n qvtfskRr+g++KKA+EL++LC+++va+i+fs+ gk++ +
  XP_022732342.1 16 KKIAKKNNLQVTFSKRRAGLFKKASELCTLCGVDVAIIVFSPAGKVFSF 64
                    678999****************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MMQKNPIQGR QKLAMKKIAK KNNLQVTFSK RRAGLFKKAS ELCTLCGVDV AIIVFSPAGK  60
VFSFGHPQVE STIDRFFSRN PCLHSSNTHK LVEAHRNANI QELNAQLAQL LDMLEVEKRK  120
GEAFEEIREA GRRKCWWQAP IDELGLNELQ QLRIALEELK RNVTKQGNQV LVDSSHCWPF  180
LAANGIGGGV FPFGNEGYEM DPASSITQMY KFGHQGLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.18e-55M-type_MADS family protein