PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732352.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 1142aa MW: 128003 Da PI: 6.5128

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	69.5	4.7e-22	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k lt sd++++g +++p++ ae++ +++++ ++l+ +d++ +sW++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + +++ XP_022732352.1 126 FCKNLTASDTSTHGGFSVPRRAAEKIfppldfSMQPPA-QELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR--DEK 217 89***************************9445444.38**********************************************4..466 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +l++++ r+ XP_022732352.1 218 SQLLLGIKRA 227 6678888765 PP
2	Auxin_resp	123.6	1.4e-40	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k+ ka++++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+nS+WrsL+ XP_022732352.1 252 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYTKAIYTQVSLGMRFRMMFETEESGIRRYMGTITGISDLDPVRWKNSQWRSLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1142 aa Download sequence
MKAPPTGFLA NSAEGDRKII NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDFIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VNKYEKEALL ASDMGLKQSR 120 QPAEFFCKNL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELVARD LHDNSWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIKRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYTKAIYTQV SLGMRFRMMF 300 ETEESGIRRY MGTITGISDL DPVRWKNSQW RSLQVGWDES TAGERPSRVS VWEIEPVVTP 360 FYICPPPFFR PRFPKQPGMP DDESDIENAF KRAMPWLGDD FGMKDAPSSI FPGLSLVQWM 420 SMQQNNQFPA AQSGFFPSVV SSNPLHNNLS TDDPSKLLNF QSPSLPSSNM QFNKANANQV 480 NQLPQAPMTW PQQQQLQQLL QTPLNQHQQQ QQQSQQQLQR QQPQQPQPHL LHQQQPQPQP 540 PTQHQQQQQQ QQQQEQLRQQ PQPQQQQQQQ QQEQLRQQPQ PQQQLQQQAF LPAQVNNGII 600 APNQIPNQNL HQPAVYSQFL ASNSQSTQTI FSANKTSYPL TSLPQDTQIQ QQMEQQTNLI 660 QRQQQQTQLQ QSPLQLLQQN LSQRTQQQQQ QQQIQQLSQQ GLSEQQLQLQ LLQKLQQQQQ 720 QQQQQQSSQQ LLSPAASLLK PPMVQQQPTL QQNQPLQQLP LSQSQPQPLG SNGFSTSMLM 780 QPQQISLNQP QSQNKPLMAM RTHSSLTDGD APSCSTSPST NNCQVSPSNF LNRSQQVPSI 840 LVTDSVVEPA STLVQELQSK PDIRIKHELP TSKGIDQSKY KSTVTDQLEA SSSGTSYCLD 900 AGTIQHNFSL PTFLEGDVQS SARNNLPFTT NINGLAPDTL LSRGYDSQKD LQNLLSNYVG 960 NPRDIDTELS TAAISSQSFG VPNMPFKTGC SNDVAITETG VLNGGLWANQ TQRMRTYTKV 1020 QKRGSVGRSI DVNRYKGYDE LRHDLARMFG IEGQLEDPQS SDWKLVYVDH ENDILLVGDD 1080 PWDEFVSCVQ SIKILSSAEV QQMSLDGDLG NVAVPNQACS GTDSGNAWRG HYDDTSAASF 1140 NR

Sequence ? help Back to Top

Protein Sequence Length: 1142 aa Download sequence

MKAPPTGFLA NSAEGDRKII NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
TDFIPSYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VNKYEKEALL ASDMGLKQSR  120
QPAEFFCKNL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELVARD LHDNSWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIKRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYTKAIYTQV SLGMRFRMMF  300
ETEESGIRRY MGTITGISDL DPVRWKNSQW RSLQVGWDES TAGERPSRVS VWEIEPVVTP  360
FYICPPPFFR PRFPKQPGMP DDESDIENAF KRAMPWLGDD FGMKDAPSSI FPGLSLVQWM  420
SMQQNNQFPA AQSGFFPSVV SSNPLHNNLS TDDPSKLLNF QSPSLPSSNM QFNKANANQV  480
NQLPQAPMTW PQQQQLQQLL QTPLNQHQQQ QQQSQQQLQR QQPQQPQPHL LHQQQPQPQP  540
PTQHQQQQQQ QQQQEQLRQQ PQPQQQQQQQ QQEQLRQQPQ PQQQLQQQAF LPAQVNNGII  600
APNQIPNQNL HQPAVYSQFL ASNSQSTQTI FSANKTSYPL TSLPQDTQIQ QQMEQQTNLI  660
QRQQQQTQLQ QSPLQLLQQN LSQRTQQQQQ QQQIQQLSQQ GLSEQQLQLQ LLQKLQQQQQ  720
QQQQQQSSQQ LLSPAASLLK PPMVQQQPTL QQNQPLQQLP LSQSQPQPLG SNGFSTSMLM  780
QPQQISLNQP QSQNKPLMAM RTHSSLTDGD APSCSTSPST NNCQVSPSNF LNRSQQVPSI  840
LVTDSVVEPA STLVQELQSK PDIRIKHELP TSKGIDQSKY KSTVTDQLEA SSSGTSYCLD  900
AGTIQHNFSL PTFLEGDVQS SARNNLPFTT NINGLAPDTL LSRGYDSQKD LQNLLSNYVG  960
NPRDIDTELS TAAISSQSFG VPNMPFKTGC SNDVAITETG VLNGGLWANQ TQRMRTYTKV  1020
QKRGSVGRSI DVNRYKGYDE LRHDLARMFG IEGQLEDPQS SDWKLVYVDH ENDILLVGDD  1080
PWDEFVSCVQ SIKILSSAEV QQMSLDGDLG NVAVPNQACS GTDSGNAWRG HYDDTSAASF  1140
NR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein