PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732431.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 648aa MW: 72673.7 Da PI: 8.3714

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	1e-16	306	352	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT +Ed +l+++vkq+G + W+ Ia+ + gR +kqc++rw+++l XP_022732431.1 306 KGQWTDDEDRKLIRLVKQYGVRKWAQIAENLV-GRAGKQCRERWHNHL 352 799***************************.***********97 PP
2	Myb_DNA-binding	51.9	1.7e-16	358	400	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eE+ +lv+a+ + G++ W+ Ia+ ++ gRt++ +k++w+ XP_022732431.1 358 KDSWSEEEERILVEAHGKVGNR-WAEIAKFIP-GRTENAIKNHWN 400 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MLREQDELDF AIYLINKSTG QEVTKLNSPE IMKILSNPHS PFDIYRVKVT VEGCNVLLVL 60 LVVLKISLSQ KGKSKVVQEI KNVPQKRFSV ILDKLLGWAD ESEKKLRSYT QQQFSIVGLI 120 SPVHQYLFLH VAFSKPCYKL NSLLSKASVM GSLFMEGVRG GGGAFGYGNL LCNNKSSVYK 180 PSPPLSAIDR FLGGQNHSSH HDQQYSTQND MKISKGTVLG SSTTDGLLRG FSFSSVAIGG 240 YLAGVSWQSN LEESFVDGLL VDGDSLALTD DKNPNMEMKE LKVSMKSFPK GVGERNKKVA 300 SAALVKGQWT DDEDRKLIRL VKQYGVRKWA QIAENLVGRA GKQCRERWHN HLRPNIKKDS 360 WSEEEERILV EAHGKVGNRW AEIAKFIPGR TENAIKNHWN ATKRRQNSRK KNKQNDNKNG 420 KAQSSILQDY IRSQNLNSNN RTTNIPSINC STTSTTPSSS TFSEDLSSQF KYFLPEEPSE 480 SYDSQPLIAQ TYDEELLFMQ NFFSDNNNNT QASVDYCQTR SPTEVKSILA DHNLSNGSST 540 INCPRFNYEV NDVQQWPNPA DHCGFSSSII DPNFFTNSLE EKEPRTTYLF SDLYLSRLLN 600 IGATTSSFCT GQGYSTNMNT NPLSEQASSD GRKEMDLIEM VSSSQFCP

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MLREQDELDF AIYLINKSTG QEVTKLNSPE IMKILSNPHS PFDIYRVKVT VEGCNVLLVL  60
LVVLKISLSQ KGKSKVVQEI KNVPQKRFSV ILDKLLGWAD ESEKKLRSYT QQQFSIVGLI  120
SPVHQYLFLH VAFSKPCYKL NSLLSKASVM GSLFMEGVRG GGGAFGYGNL LCNNKSSVYK  180
PSPPLSAIDR FLGGQNHSSH HDQQYSTQND MKISKGTVLG SSTTDGLLRG FSFSSVAIGG  240
YLAGVSWQSN LEESFVDGLL VDGDSLALTD DKNPNMEMKE LKVSMKSFPK GVGERNKKVA  300
SAALVKGQWT DDEDRKLIRL VKQYGVRKWA QIAENLVGRA GKQCRERWHN HLRPNIKKDS  360
WSEEEERILV EAHGKVGNRW AEIAKFIPGR TENAIKNHWN ATKRRQNSRK KNKQNDNKNG  420
KAQSSILQDY IRSQNLNSNN RTTNIPSINC STTSTTPSSS TFSEDLSSQF KYFLPEEPSE  480
SYDSQPLIAQ TYDEELLFMQ NFFSDNNNNT QASVDYCQTR SPTEVKSILA DHNLSNGSST  540
INCPRFNYEV NDVQQWPNPA DHCGFSSSII DPNFFTNSLE EKEPRTTYLF SDLYLSRLLN  600
IGATTSSFCT GQGYSTNMNT NPLSEQASSD GRKEMDLIEM VSSSQFCP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	9e-63	MYB family protein