PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732439.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 351aa MW: 37778.7 Da PI: 5.7775

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93.8	1.4e-29	171	224	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_022732439.1 171 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMHLMNVEGLTRENVASHLQKYRL 224 59*****************.******************************8 PP
2	Myb_DNA-binding	47.5	4e-15	173	223	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ XP_022732439.1 173 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMHLMNvEGLTRENVASHLQKYR 223 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGEEAKVSEF ETKGGDDKEV TATAAATVID DDDDVDERVL EWEMGLPNCD DLTPLSQSLI 60 PPELASAFSI SPEPRRSAFD VNLASHNTIS SLRSTGAHSS TTNNNNNSNN TNNNFCSFND 120 PMVVEPEGDG SGSGSGSEPK KTKRMDIAEE ADSAVRTTEN SDDPSARTLK RPRLVWTPQL 180 HKRFVDVVAH LGIKNAVPKT IMHLMNVEGL TRENVASHLQ KYRLYLKRMQ GLSNEGPSAS 240 DQLFASTPVP QSLHEGGSGG GGSGVGGGSA NGNGHVGTAI PMPYGAPMMP VPMPMYGHVG 300 MHQVGYHHHH HQNGYEANSY GMMQQTDWSG GNKYTSVVSY PHHMAPNDKL N

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGEEAKVSEF ETKGGDDKEV TATAAATVID DDDDVDERVL EWEMGLPNCD DLTPLSQSLI  60
PPELASAFSI SPEPRRSAFD VNLASHNTIS SLRSTGAHSS TTNNNNNSNN TNNNFCSFND  120
PMVVEPEGDG SGSGSGSEPK KTKRMDIAEE ADSAVRTTEN SDDPSARTLK RPRLVWTPQL  180
HKRFVDVVAH LGIKNAVPKT IMHLMNVEGL TRENVASHLQ KYRLYLKRMQ GLSNEGPSAS  240
DQLFASTPVP QSLHEGGSGG GGSGVGGGSA NGNGHVGTAI PMPYGAPMMP VPMPMYGHVG  300
MHQVGYHHHH HQNGYEANSY GMMQQTDWSG GNKYTSVVSY PHHMAPNDKL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	3e-75	G2-like family protein