PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732628.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 216aa    MW: 23829.1 Da    PI: 8.6106
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY212.51.5e-65101792169
           YABBY   2 dvfssseqvCyvqCnfCntila.....vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvek 88 
                     d+   seq+Cyv+Cn C+t+la     vsvP tslfk+vtvrCGhCt+ l vn++      a + hl +s+  +   llee  + + n+ +n+++
  XP_022732628.1  10 DHLPPSEQLCYVHCNICDTVLAvpltnVSVPCTSLFKTVTVRCGHCTNHLPVNMRGLLLPSANQFHLAHSFFSPsynLLEEISNPSPNILVNQTN 104
                     577899***************94444459**********************99999999999999999999887344555555555555555444 PP

           YABBY  89 eesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                     ++  + s      ++   + vp++p ++rPPekrqrvPsaynrfik+eiqrika+nPdi+hr afsaaaknWahfP+ihfg
  XP_022732628.1 105 TTDFTLS------TRGAADGVPKPPVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHRKAFSAAAKNWAHFPHIHFG 179
                     3333322......24567889**999******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSSSSTLSLD HLPPSEQLCY VHCNICDTVL AVPLTNVSVP CTSLFKTVTV RCGHCTNHLP  60
VNMRGLLLPS ANQFHLAHSF FSPSYNLLEE ISNPSPNILV NQTNTTDFTL STRGAADGVP  120
KPPVINRPPE KRQRVPSAYN RFIKDEIQRI KAGNPDITHR KAFSAAAKNW AHFPHIHFGI  180
MPDQNAKKTN VRQQEGEDAL LKDGFFASAN VGVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-81YABBY family protein