PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732634.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 492aa MW: 51884.4 Da PI: 6.4323

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	6.9e-12	253	298	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+Pk+ K +Ka++L + +eY+k Lq XP_022732634.1 253 HSIAERLRREKIAERMKNLQELVPKS-----NKTDKASMLDEIIEYVKFLQ 298 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MISSNHSLEC LAAHNTPSLV PSGESGCGVE HGLMSGEGGP QMVGENCSGN SSKEMLNGSL 60 GFGNLGLQFN TAVLSSGSLN LGSSNDLPVV GDMTPSLSFN ERGHILCNGG ESSEFRRSLT 120 GLETLSPIPQ VWHPQPYDGV SSIPTLMGQT RMQSSRLQGE NGNVDEEGNI NRFFVEIDKI 180 LQPENLSASI NPKGKQDMQN SLCSSFPADH QITKTTIGLP SLLQSASPTP NSGCNGIGKP 240 RARARRGQAT DPHSIAERLR REKIAERMKN LQELVPKSNK TDKASMLDEI IEYVKFLQLQ 300 VKVLSMSRLG AAGAVVPLIT DGQAEGSKGL SLTPLVGHGV DLSPSPDQVV IEQEVVKLME 360 SNVTMAMQYL QSKGLCLMPI ALAAAISNGK TSSSSAPASE ERKKFGFTNI PKNNDIIHNT 420 CSSNGHVQNC NCSSSSSSSS SSSSSGSLSG DGIHPMTSDG NFMIGKISAG IMANGCNGTF 480 KQEEVNTLCT AK

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MISSNHSLEC LAAHNTPSLV PSGESGCGVE HGLMSGEGGP QMVGENCSGN SSKEMLNGSL  60
GFGNLGLQFN TAVLSSGSLN LGSSNDLPVV GDMTPSLSFN ERGHILCNGG ESSEFRRSLT  120
GLETLSPIPQ VWHPQPYDGV SSIPTLMGQT RMQSSRLQGE NGNVDEEGNI NRFFVEIDKI  180
LQPENLSASI NPKGKQDMQN SLCSSFPADH QITKTTIGLP SLLQSASPTP NSGCNGIGKP  240
RARARRGQAT DPHSIAERLR REKIAERMKN LQELVPKSNK TDKASMLDEI IEYVKFLQLQ  300
VKVLSMSRLG AAGAVVPLIT DGQAEGSKGL SLTPLVGHGV DLSPSPDQVV IEQEVVKLME  360
SNVTMAMQYL QSKGLCLMPI ALAAAISNGK TSSSSAPASE ERKKFGFTNI PKNNDIIHNT  420
CSSNGHVQNC NCSSSSSSSS SSSSSGSLSG DGIHPMTSDG NFMIGKISAG IMANGCNGTF  480
KQEEVNTLCT AK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	5e-59	bHLH family protein