PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732682.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 264aa MW: 29560.1 Da PI: 5.21

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl XP_022732682.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.4	2.4e-16	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++E++l +d++ +lG++ W++Ia++++ gRt++++k++w+++ XP_022732682.1 70 LSEDEEKLVIDLHGRLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 589**************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL SEDEEKLVID LHGRLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPATHEPLN KQAKAEESSS HADNSAENHI TENDSIVNSS KDNSSSPTEN CSSTNDSNLL 180 DSICNDESLL TSLWMDEPPL VDASWNSIPA GETCNGTSLP SWEDNCAWLL DCQDFGIHDF 240 GFDFLNDVEV NTMNTLEMGD KTTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	1e-101	MYB family protein