PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732786.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 211aa    MW: 24264.9 Da    PI: 9.8887
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.3e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss
  XP_022732786.1  9 KRIENASSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59
                    79***********************************************96 PP
2K-box78.41.8e-26831701097
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                      e+++++ ++++  + k+ie L+ ++R+llG++Le++sl++Lq Le+qLe+sl+kiR++Kn+l+ eqie+l+  e++l+een +Lr +
  XP_022732786.1  83 VEQNMQNVKEDAHSMAKKIEFLEDSKRKLLGNGLEPCSLNDLQVLENQLERSLSKIRARKNQLFWEQIEKLKGEERRLEEENAKLRGQ 170
                     5789*********************************************************************************966 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MVRGKTQMKR IENASSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSA  60
CMNKIIDRYQ KKEKDLGIGS KGVEQNMQNV KEDAHSMAKK IEFLEDSKRK LLGNGLEPCS  120
LNDLQVLENQ LERSLSKIRA RKNQLFWEQI EKLKGEERRL EEENAKLRGQ CGVRPRQSST  180
SLSDHELQTQ SIEVETELFI GPPETRIIQK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.12e-67MIKC_MADS family protein