PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732906.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 620aa MW: 69501 Da PI: 4.9403

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	4.1e-14	419	464	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h ErrRR++iN+ f L++l+P++ K +K++iL ++eY+++L XP_022732906.1 419 NHVLSERRRREKINELFMILKSLVPSN-----SKADKVSILDDTIEYLQDL 464 68889*******************8.....7*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MATGVQNQER VPVNLKKQLV LAVRNIQWSY AIFWSISAGQ PGVLEWGDGY YNGDIKTRKT 60 VQAVELNADQ LGLQRSEQLR ELYESLSAAD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF 120 VFNIGQGLPG RTLSSGQPIW LCNAHYAESK VFSRSLLAKS ASIQTVVCFP FSRGVIELGV 180 TDLVSEELSL IQFIKTSFSD GPQTFVSNKS IPVAGRTGYK KDFSCPSLLG CEQQEMASPN 240 DSSDGYEPNQ PAEDPFMIEG ITDGVSQVQS WQFMDEEFSN CVDHSLNSSD CISQTVVDHG 300 NAVPLSQGEK DNDNELTSLN LPSDDPHYQT VLSALLNSSH QLILGPHFRN SNQESSFVSW 360 KKNGLVKSQK ARDETPQKLL KKILFEVPHM HDKGLLESPE DNGARDAAWR LEADEIYGNH 420 VLSERRRREK INELFMILKS LVPSNSKADK VSILDDTIEY LQDLGRRVED LESCRELTDL 480 EVRTKRKRQD HVERTSDNYD DNKITIRKKS SPNKRKACDI DEVEQEIDYV AFKDDSTNNV 540 TVTVSLNKKD FLIEFSCPWR EGILLEIVDA LSILNLDCQS VQSSTTEGIL SLTIKSKYKG 600 STVAKPGTVK QALQRVAWKC

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MATGVQNQER VPVNLKKQLV LAVRNIQWSY AIFWSISAGQ PGVLEWGDGY YNGDIKTRKT  60
VQAVELNADQ LGLQRSEQLR ELYESLSAAD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF  120
VFNIGQGLPG RTLSSGQPIW LCNAHYAESK VFSRSLLAKS ASIQTVVCFP FSRGVIELGV  180
TDLVSEELSL IQFIKTSFSD GPQTFVSNKS IPVAGRTGYK KDFSCPSLLG CEQQEMASPN  240
DSSDGYEPNQ PAEDPFMIEG ITDGVSQVQS WQFMDEEFSN CVDHSLNSSD CISQTVVDHG  300
NAVPLSQGEK DNDNELTSLN LPSDDPHYQT VLSALLNSSH QLILGPHFRN SNQESSFVSW  360
KKNGLVKSQK ARDETPQKLL KKILFEVPHM HDKGLLESPE DNGARDAAWR LEADEIYGNH  420
VLSERRRREK INELFMILKS LVPSNSKADK VSILDDTIEY LQDLGRRVED LESCRELTDL  480
EVRTKRKRQD HVERTSDNYD DNKITIRKKS SPNKRKACDI DEVEQEIDYV AFKDDSTNNV  540
TVTVSLNKKD FLIEFSCPWR EGILLEIVDA LSILNLDCQS VQSSTTEGIL SLTIKSKYKG  600
STVAKPGTVK QALQRVAWKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	424	429	ERRRRE
2	425	430	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein