PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732915.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 615aa MW: 69014.5 Da PI: 4.9403

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	4.1e-14	414	459	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h ErrRR++iN+ f L++l+P++ K +K++iL ++eY+++L XP_022732915.1 414 NHVLSERRRREKINELFMILKSLVPSN-----SKADKVSILDDTIEYLQDL 459 68889*******************8.....7*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MATGVQNQER VPVNLKKQLV LAVRNIQWSY AIFWSISAGQ PGVLEWGDGY YNGDIKTRKT 60 VQAVELNADQ LGLQRSEQLR ELYESLSAAD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF 120 VFNIGQGLPG RTLSSGQPIW LCNAHYAESK VFSRSLLAKT VVCFPFSRGV IELGVTDLVS 180 EELSLIQFIK TSFSDGPQTF VSNKSIPVAG RTGYKKDFSC PSLLGCEQQE MASPNDSSDG 240 YEPNQPAEDP FMIEGITDGV SQVQSWQFMD EEFSNCVDHS LNSSDCISQT VVDHGNAVPL 300 SQGEKDNDNE LTSLNLPSDD PHYQTVLSAL LNSSHQLILG PHFRNSNQES SFVSWKKNGL 360 VKSQKARDET PQKLLKKILF EVPHMHDKGL LESPEDNGAR DAAWRLEADE IYGNHVLSER 420 RRREKINELF MILKSLVPSN SKADKVSILD DTIEYLQDLG RRVEDLESCR ELTDLEVRTK 480 RKRQDHVERT SDNYDDNKIT IRKKSSPNKR KACDIDEVEQ EIDYVAFKDD STNNVTVTVS 540 LNKKDFLIEF SCPWREGILL EIVDALSILN LDCQSVQSST TEGILSLTIK SKYKGSTVAK 600 PGTVKQALQR VAWKC

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MATGVQNQER VPVNLKKQLV LAVRNIQWSY AIFWSISAGQ PGVLEWGDGY YNGDIKTRKT  60
VQAVELNADQ LGLQRSEQLR ELYESLSAAD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF  120
VFNIGQGLPG RTLSSGQPIW LCNAHYAESK VFSRSLLAKT VVCFPFSRGV IELGVTDLVS  180
EELSLIQFIK TSFSDGPQTF VSNKSIPVAG RTGYKKDFSC PSLLGCEQQE MASPNDSSDG  240
YEPNQPAEDP FMIEGITDGV SQVQSWQFMD EEFSNCVDHS LNSSDCISQT VVDHGNAVPL  300
SQGEKDNDNE LTSLNLPSDD PHYQTVLSAL LNSSHQLILG PHFRNSNQES SFVSWKKNGL  360
VKSQKARDET PQKLLKKILF EVPHMHDKGL LESPEDNGAR DAAWRLEADE IYGNHVLSER  420
RRREKINELF MILKSLVPSN SKADKVSILD DTIEYLQDLG RRVEDLESCR ELTDLEVRTK  480
RKRQDHVERT SDNYDDNKIT IRKKSSPNKR KACDIDEVEQ EIDYVAFKDD STNNVTVTVS  540
LNKKDFLIEF SCPWREGILL EIVDALSILN LDCQSVQSST TEGILSLTIK SKYKGSTVAK  600
PGTVKQALQR VAWKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	419	424	ERRRRE
2	420	425	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein