PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732939.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 181aa    MW: 20617.5 Da    PI: 8.7693
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY171.94.1e-5361584170
           YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 
                     +s++eq+Cy+ Cn Cn ilav+vP +slf+++ vrCG Ct+l svn+a++ q +a ++         ++ ++ ++e  ++    +++  +++v++
  XP_022732939.1   6 NSAPEQLCYIPCNLCNIILAVNVPCSSLFETLMVRCGQCTNLCSVNMATSFQFRAGKDI--------QVPNDTSSEYRIDL--GSSSRCKNKVPK 90 
                     6899***********************************************99999985........23333333333322..222222333333 PP

           YABBY  99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                         + ++  ++r   v+rPP+kr r+Ps yn+fikeeiqrik +nPdishreafs+aaknWa fP+ihfgl
  XP_022732939.1  91 ----RATTITTTRERVVNRPPDKRHRAPSLYNQFIKEEIQRIKLNNPDISHREAFSTAAKNWARFPHIHFGL 158
                     ....22333444555689****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MSSSNNSAPE QLCYIPCNLC NIILAVNVPC SSLFETLMVR CGQCTNLCSV NMATSFQFRA  60
GKDIQVPNDT SSEYRIDLGS SSRCKNKVPK RATTITTTRE RVVNRPPDKR HRAPSLYNQF  120
IKEEIQRIKL NNPDISHREA FSTAAKNWAR FPHIHFGLML ETENQPKLND DSTEHFQQLL  180
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.11e-78YABBY family protein