PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732952.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 421aa MW: 46643.7 Da PI: 8.3519

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.9e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_022732952.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	16.2	3.1e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_022732952.1 134 WVCEKCSKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MLDNTSASAL PSSSSDPLTP LENGANQKRK RKPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QEVKKRVFVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHSN QKQWVCEKCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACTIRQVQPE LQALHPACSS RTASSTSPSS DANFSIAPLP GLPMPKSTEP VFLHSYASTS 240 GHQNHLQQNL ELQLLPSSST HSSWNSDENC ATHLKLSIGS SDGVEKSELN KLSLDTCREN 300 NATETALEAI RLKKFASEQL KLAMAEKAYA EKARQEAKKQ IEMAELEFAS AKMLRQRAQS 360 ELEKAQVLKA QATKKISATI MQITCQACKH QFQTSTAAVP ADETSLAISY MSSATTEGEG 420 E

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MLDNTSASAL PSSSSDPLTP LENGANQKRK RKPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QEVKKRVFVC PEPSCLHHDP CHALGDLVGI  120
KKHFRRKHSN QKQWVCEKCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACTIRQVQPE LQALHPACSS RTASSTSPSS DANFSIAPLP GLPMPKSTEP VFLHSYASTS  240
GHQNHLQQNL ELQLLPSSST HSSWNSDENC ATHLKLSIGS SDGVEKSELN KLSLDTCREN  300
NATETALEAI RLKKFASEQL KLAMAEKAYA EKARQEAKKQ IEMAELEFAS AKMLRQRAQS  360
ELEKAQVLKA QATKKISATI MQITCQACKH QFQTSTAAVP ADETSLAISY MSSATTEGEG  420
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-153	C2H2 family protein