PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732954.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family BBR-BPC
Protein Properties Length: 282aa    MW: 31627.2 Da    PI: 10.1376
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind347.14e-10612821301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd  + rn+gyy+p+  +k +lglqlmss+aerd+k     r+ nl + +++aa+++rd         m++  rd+++++        ++k++
  XP_022732954.1   1 MDDDVLNMRNWGYYDPS--FKGHLGLQLMSSMAERDTKSffpgRDPNL-MVTPNAAFHSRDcvvseshipMNY-VRDSWISQ--------REKFF 83 
                     99998878*******99..*****************************.************************.99*****9........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskk 176
                     ++l++++       +++++l++t+ ++sl       l++++   +r+e+   + ++e +++ +ke  + kkrq +++pk++kakk++k    s++
  XP_022732954.1  84 NMLPATT-------PNYGILPETSAAHSLPI-----LQPPPDSsTRDER--MVGKVE-EPPANKEGVQLKKRQGGASPKTPKAKKPRK----SND 159
                     ****665.......689**********9988.....7777776344444..444544.57777888888899*************999....334 PP

       GAGA_bind 177 kvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLek 271
                     ++++    +r+k  kks+d+ +ng ++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+Lek
  XP_022732954.1 160 NTNATV--QRVKPAKKSMDIKINGYEMDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEK 252
                     444444..789************************************************************************************ PP

       GAGA_bind 272 LaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     Laae y++snp+DL++hWA+HGtnkfvtir
  XP_022732954.1 253 LAAENYNFSNPIDLRTHWARHGTNKFVTIR 282
                     *****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDDDVLNMRN WGYYDPSFKG HLGLQLMSSM AERDTKSFFP GRDPNLMVTP NAAFHSRDCV  60
VSESHIPMNY VRDSWISQRE KFFNMLPATT PNYGILPETS AAHSLPILQP PPDSSTRDER  120
MVGKVEEPPA NKEGVQLKKR QGGASPKTPK AKKPRKSNDN TNATVQRVKP AKKSMDIKIN  180
GYEMDISGIP IPVCSCTGIP QQCYRWGCGG WQSACCTTNV SMYPLPMSTK RRGARIAGRK  240
MSQGAFKKVL EKLAAENYNF SNPIDLRTHW ARHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.11e-114BBR-BPC family protein