PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733083.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 456aa MW: 50155 Da PI: 7.9373

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.9	1.1e-41	163	240	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+akeyh++h+vCe hsk+p+v+v gle+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+ XP_022733083.1 163 RCQVEGCNLDLSSAKEYHQKHRVCESHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQT 240 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MKHSMSSISL MEWNAKTPLQ WDWENLMMLN ATPTEIPRKL TPIEWDIDGE GGMDYGSLYS 60 SSAAGGSGGS GSDLGLASLS KSSKSASINS SSMGEVKATK FTLETFEAVP DDISNKKEVS 120 KVELTDVCAG SNAKNSSYSV NPGPSPIPAK RSKPICQSTH VLRCQVEGCN LDLSSAKEYH 180 QKHRVCESHS KSPKVIVGGL ERRFCQQCSR FHGLSEFDEK KRSCRRRLSD HNARRRKPQT 240 EAIHFNAARL TSSSYDGKQQ VGFVWNKVPF LHARPNEDFT WEGTSDFKSP QFKGYTPAKV 300 GNVNGQLQLP GNQLLNSITM QCHDSNTCLP AKGKHSTTAV LNQGVEESTV ASNMGTTQDI 360 HRALSLLSND TWDSCKPKHG SLAYSMHANP ATMSQPAMNA VSQGFPLALS ENWLMEQQTA 420 ESQAHKALHS DGDNHFQEFQ LHKASYDSSF FSNQIN

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MKHSMSSISL MEWNAKTPLQ WDWENLMMLN ATPTEIPRKL TPIEWDIDGE GGMDYGSLYS  60
SSAAGGSGGS GSDLGLASLS KSSKSASINS SSMGEVKATK FTLETFEAVP DDISNKKEVS  120
KVELTDVCAG SNAKNSSYSV NPGPSPIPAK RSKPICQSTH VLRCQVEGCN LDLSSAKEYH  180
QKHRVCESHS KSPKVIVGGL ERRFCQQCSR FHGLSEFDEK KRSCRRRLSD HNARRRKPQT  240
EAIHFNAARL TSSSYDGKQQ VGFVWNKVPF LHARPNEDFT WEGTSDFKSP QFKGYTPAKV  300
GNVNGQLQLP GNQLLNSITM QCHDSNTCLP AKGKHSTTAV LNQGVEESTV ASNMGTTQDI  360
HRALSLLSND TWDSCKPKHG SLAYSMHANP ATMSQPAMNA VSQGFPLALS ENWLMEQQTA  420
ESQAHKALHS DGDNHFQEFQ LHKASYDSSF FSNQIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	237	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	5e-71	SBP family protein