PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733260.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 480aa MW: 54045.4 Da PI: 6.5741

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.9	2.8e-14	25	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + ++G+++W+tI +++ +t qc+ rw++yl XP_022733260.1 25 TWTQEEDDILREQISLHGTENWATIVSKFK-DKTTRQCRRRWYTYL 69 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.7e-14	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_022733260.1 75 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 118 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MQETKKNGGG GRNEDSKKKE RHIVTWTQEE DDILREQISL HGTENWATIV SKFKDKTTRQ 60 CRRRWYTYLN SDFKKGGWSP EEDMLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC 120 KKRAKYEALA KEITTSCINP NNKRILLQNG FSTDGTTECT APVKRMRRSH ISDLSENCNF 180 GDRAHIVPGT IINQQLRHPF AVLGQNLQHV DNVVVQSQVN NVKDVFNDAA QNNRTQGTFL 240 NKDDPKITAL MQQAELLSSL ALKVNTDKTE QSLENAWKVL QDFLNQSKEN VIFRYTISDI 300 DFQLEDFKDL LEDLRSSNEG SRLSWRQPDL HEESPASSEY STGSILMHHL DGEKGEETEV 360 KIDALHQDIP SSHIGEQNCR SEEAKRALCS ANTNHVEIIP TCDDQTNIVV ASTSSSAELS 420 SPVQVTPLFS SLAAGIPSPK FSESERNFLL KTLGMESPSP NPGNNLSQPP TCKRVLLHSL

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MQETKKNGGG GRNEDSKKKE RHIVTWTQEE DDILREQISL HGTENWATIV SKFKDKTTRQ  60
CRRRWYTYLN SDFKKGGWSP EEDMLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC  120
KKRAKYEALA KEITTSCINP NNKRILLQNG FSTDGTTECT APVKRMRRSH ISDLSENCNF  180
GDRAHIVPGT IINQQLRHPF AVLGQNLQHV DNVVVQSQVN NVKDVFNDAA QNNRTQGTFL  240
NKDDPKITAL MQQAELLSSL ALKVNTDKTE QSLENAWKVL QDFLNQSKEN VIFRYTISDI  300
DFQLEDFKDL LEDLRSSNEG SRLSWRQPDL HEESPASSEY STGSILMHHL DGEKGEETEV  360
KIDALHQDIP SSHIGEQNCR SEEAKRALCS ANTNHVEIIP TCDDQTNIVV ASTSSSAELS  420
SPVQVTPLFS SLAAGIPSPK FSESERNFLL KTLGMESPSP NPGNNLSQPP TCKRVLLHSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	0.0	MYB family protein