PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733399.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 192aa    MW: 22117.5 Da    PI: 7.0634
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.18.2e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krie+ks rqvtfskRr g++KKA  LSvLCd+e+a++ifss gklye+ss
  XP_022733399.1  9 KRIEDKSSRQVTFSKRRSGLIKKARQLSVLCDVEIALVIFSSGGKLYEFSS 59
                    79***********************************************96 PP
2K-box41.94.1e-1566158999
           K-box   9 leeakaeslqqelakLkkeienLq..reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                       e+ + +++ e++  k+ +e L+  +e+ h++  +Le+ ++++L  +e+qL+++l + R++K++l++e+i +lq+kek l+ en+ L+++++
  XP_022733399.1  66 ILERYHRHCELESEASKNVNEALRsyTELLHIVQSQLEEPTVEQLSVMEKQLDTALLETRARKTQLMMESIMTLQEKEKLLKAENELLETEIA 158
                     5566788899999999********9999*************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MGRRKVEMKR IEDKSSRQVT FSKRRSGLIK KARQLSVLCD VEIALVIFSS GGKLYEFSSS  60
ESLARILERY HRHCELESEA SKNVNEALRS YTELLHIVQS QLEEPTVEQL SVMEKQLDTA  120
LLETRARKTQ LMMESIMTLQ EKEKLLKAEN ELLETEIAAM DKNEDKNEVV IGFNDPKHLG  180
HLSQLQTLSL LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65050.22e-44MIKC_MADS family protein