PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733560.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 217aa    MW: 25028.8 Da    PI: 9.9193
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.51.8e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gkl e++s
  XP_022733560.1 10 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPRGKLCEFAS 59
                    8***********************************************86 PP
2K-box88.31.5e-2969165197
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y+++++++ +e+++++l++e+a++ k+ie Lq   R+llGe+L+s++l+eLqq+eqqLe+s++++R++K+++++eqi++lq+kek l  en +L 
  XP_022733560.1  69 YKRHTKTKPTEQNMQHLKTEAANMVKKIEILQDLRRKLLGEGLGSCTLEELQQIEQQLERSVSNVRARKTQVFKEQIDRLQEKEKILAAENAKLY 163
                     5667777899***********************************************************************************98 PP

           K-box  96 kk 97 
                     +k
  XP_022733560.1 164 EK 165
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSP RGKLCEFASS  60
SMQETIERYK RHTKTKPTEQ NMQHLKTEAA NMVKKIEILQ DLRRKLLGEG LGSCTLEELQ  120
QIEQQLERSV SNVRARKTQV FKEQIDRLQE KEKILAAENA KLYEKPWKGS KEQKENIPYN  180
ESSPNSDVET DLFIGPPEGR TKSNLQRANP MPCIYEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-81MIKC_MADS family protein