PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733562.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 26652.7 Da    PI: 9.438
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.32e-282069251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gkl e++s
  XP_022733562.1 20 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPRGKLCEFAS 69
                    8***********************************************86 PP
2K-box88.51.2e-2979175197
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y+++++++ +e+++++l++e+a++ k+ie Lq   R+llGe+L+s++l+eLqq+eqqLe+s++++R++K+++++eqi++lq+kek l  en +L 
  XP_022733562.1  79 YKRHTKTKPTEQNMQHLKTEAANMVKKIEILQDLRRKLLGEGLGSCTLEELQQIEQQLERSVSNVRARKTQVFKEQIDRLQEKEKILAAENAKLY 173
                     5667777899************************************************************************************9 PP

           K-box  96 kk 97 
                     +k
  XP_022733562.1 174 EK 175
                     88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MDFWVILGAE MVRGKTQMRR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSP  60
RGKLCEFASS SMQETIERYK RHTKTKPTEQ NMQHLKTEAA NMVKKIEILQ DLRRKLLGEG  120
LGSCTLEELQ QIEQQLERSV SNVRARKTQV FKEQIDRLQE KEKILAAENA KLYEKCVMQP  180
WKGSKEQKEN IPYNESSPNS DVETDLFIGP PEGRTKSNLQ RANPMPCIYE L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-80MIKC_MADS family protein