PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733563.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 25975.9 Da    PI: 9.6305
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.41.9e-281564251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gkl e++s
  XP_022733563.1 15 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPRGKLCEFAS 64
                    8***********************************************86 PP
2K-box88.61.2e-2974170197
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y+++++++ +e+++++l++e+a++ k+ie Lq   R+llGe+L+s++l+eLqq+eqqLe+s++++R++K+++++eqi++lq+kek l  en +L 
  XP_022733563.1  74 YKRHTKTKPTEQNMQHLKTEAANMVKKIEILQDLRRKLLGEGLGSCTLEELQQIEQQLERSVSNVRARKTQVFKEQIDRLQEKEKILAAENAKLY 168
                     5667777899************************************************************************************9 PP

           K-box  96 kk 97 
                     +k
  XP_022733563.1 169 EK 170
                     88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MPGAEMVRGK TQMRRIENAT SRQVTFSKRR SGLLKKAFEL SVLCDAEVAL IIFSPRGKLC  60
EFASSSMQET IERYKRHTKT KPTEQNMQHL KTEAANMVKK IEILQDLRRK LLGEGLGSCT  120
LEELQQIEQQ LERSVSNVRA RKTQVFKEQI DRLQEKEKIL AAENAKLYEK CVMQPWKGSK  180
EQKENIPYNE SSPNSDVETD LFIGPPEGRT KSNLQRANPM PCIYEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.11e-80MIKC_MADS family protein