PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733621.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 381aa MW: 43634 Da PI: 6.3881

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.1	8.5e-27	72	153	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem+ ++++k++k+lW+++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s +++y++++e XP_022733621.1 72 WVQDETRSLIGFRREMDGLFNTSKSNKHLWDQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYYKEIE 153 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MYLSEKPRPI ALYKEEGPAT ARDMIIEVTT NGDLPPHHHP LPLQQQQQQM ILGESSGEDP 60 EIKAPKKRAE TWVQDETRSL IGFRREMDGL FNTSKSNKHL WDQISAKMRE KGFDRSPTMC 120 TDKWRNLLKE FKKAKHQDRG SGSAKMSYYK EIEEILSERT KNAYKSPTPP PKVDSFMHFS 180 DKGFEDTGIS FGPAEASGRP ALNLERRLDH DGHPLAITPA DAVAASGVPP WNWRETPGNV 240 GDCQSYGGRV ITVKFGDYTR RIGIDGTADA IREAIKSAFR LRTKRAFWLE DEDHIVRSLD 300 REMPLGNYTL HLDEGLAIKL CLYDESDHIP VHTEEKIFYT EDDYRDYLAR RGYTGLREID 360 EYRNIDNMDD LRPNAIYRGV S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MYLSEKPRPI ALYKEEGPAT ARDMIIEVTT NGDLPPHHHP LPLQQQQQQM ILGESSGEDP  60
EIKAPKKRAE TWVQDETRSL IGFRREMDGL FNTSKSNKHL WDQISAKMRE KGFDRSPTMC  120
TDKWRNLLKE FKKAKHQDRG SGSAKMSYYK EIEEILSERT KNAYKSPTPP PKVDSFMHFS  180
DKGFEDTGIS FGPAEASGRP ALNLERRLDH DGHPLAITPA DAVAASGVPP WNWRETPGNV  240
GDCQSYGGRV ITVKFGDYTR RIGIDGTADA IREAIKSAFR LRTKRAFWLE DEDHIVRSLD  300
REMPLGNYTL HLDEGLAIKL CLYDESDHIP VHTEEKIFYT EDDYRDYLAR RGYTGLREID  360
EYRNIDNMDD LRPNAIYRGV S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein